The collection

Every essay — page 19

Page 19 of 42, continuing through the fields in the same order.

Orbitals Where the atoms go Bonding models What symmetry decides Beyond the octet What a spectrum settles When the molecule does not stop What the shape is for What is taught wrongly Series Named objects Orbitals Refutations Search

Orbitals

A one-electron wavefunction, drawn as a contour surface at a level somebody chose. Nodes, signs, and what the picture is a picture of.

A strength closes the gap by pulling the pairs apart; a range closes it with them together. The six rock-salt pairs' mean error in the separation against the spread between the largest and smallest, as each of two adjustments is turned up from where the per-ion contractions left them: a mean of −14.1% and a spread of 1.3 points. Multiplying the repulsion's strength reaches a mean of zero at 6.15 with a spread of 8.8 points. Multiplying every ion's exponents by one factor reaches it at 0.870 with a spread of 0.98.

The shortfall was a length, not a strength

With each third-row ion's orbital range set by its own contraction, an ionic model leaves all six rock-salt separations about fourteen per cent short, the same for every pair to 1.3 points. A shortfall common to every pair is what a strength constant is for, and one closes it at a factor of 6.15 — while spreading the six over 8.8 points, because a strength moves each equilibrium by a length, the repulsion's own decay length times the logarithm of the factor, and those lengths are not the same fraction of every separation. Scaling every ion's orbitals by one factor instead closes the mean with the six within a point of each other. It works because it is exactly a small strength change followed by a uniform stretch.

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A p function fills the polar bond's minimum, and a pair of them fills it nine times over. Carbon monoxide's σ profile along the bond at equal coefficients, for three bases: one s function on each atom, a quarter p mixed into carbon's, and a quarter p on both atoms in the sense that maximises their overlap. The minimum at π/R is 1.35% of the peak with s alone, 3.63% with p on carbon and 12.53% with p on both. The p function proposed to reduce the floor raises it, and the pair raises it most.

The third function fills the floor

A polar σ bond built from one s function per atom has a momentum profile whose minimum at π/R never reaches zero — for carbon monoxide, 1.35 per cent of the peak. The natural hope was that a p function mixed into the diffuse atom would reshape it towards the compact one and lower that floor. It cannot. At π/R an s function on one atom and a p function on the other are exactly out of phase, so a p function on one atom cancels nothing and only adds itself. With p on both atoms in the sense that makes the bond, the pair adds fifteen times as strongly as the s pair cancels: a quarter p takes the minimum to 12.5 per cent. That is eight times the whole range through which polarity moves the s-only bond.

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Carbon monoxide's three σ orbitals, and what each does at π/R. The momentum profile along the bond of each occupied σ orbital of carbon monoxide, with weights from an extended Hückel calculation over carbon and oxygen 2s and 2pσ, each scaled to its own peak, against momentum in units of π/R. At π/R the lowest, 3σ, reads 2.52% of its peak; the middle, 4σ, 8.40%; and the highest, 5σ, 85.3% — its profile peaks at 0.82 π/R and has no minimum near π/R at all.

The lone pair sits where the floor was

A polar σ bond's momentum profile has a minimum at π/R whose floor was proposed as a measure of polarity, and the essay that swept the p weight could not say whether carbon monoxide's own σ bond sat near the s-only floor of 1.35 per cent or the quarter-p value of 12.5. With the weights computed — carbon and oxygen 2s and 2pσ, extended Hückel — the answer is that carbon monoxide has no such bond. Its lowest σ orbital reads 2.5 per cent, its middle one 8.4 per cent of its own peak, and its highest, the orbital with the lone pair's sense, has no minimum at π/R at all: it peaks there. The six σ electrons together have no minimum anywhere, and the polar molecule reads lower at π/R than nitrogen does.

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Lithium hydride's one σ bond, and the minimum it would need to be covalent to have. The momentum profile along the bond of lithium hydride's occupied σ orbital, from an extended Hückel calculation over lithium 2s and 2pσ and hydrogen 1s, each curve scaled to its own peak, against momentum in units of π/R. As computed the orbital is 91% hydrogen and its profile falls monotonically, reading 10% of its peak at π/R. The same lithium 2s and hydrogen 1s with a quarter of the orbital on hydrogen do have a minimum — at 0.525 π/R, not at π/R, just below lithium's 2s node in momentum at 0.624 π/R.

The minimum belongs to the heavy atom's node

Carbon monoxide had no single σ bond for the momentum-space polarity reading to read, so the next place to look was a hydride, where there is one. Lithium hydride's computed σ orbital is ninety-one per cent hydrogen and its profile falls straight through π/R without a minimum. Across all seven first-row hydrides one occupied orbital of thirteen has a minimum at all, and where a lithium-to-boron hydride could have one, it would not be the bond's fringe: it would be the heavy atom's 2s node in momentum, a flat point that a little hydrogen tips over.

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Lithium's 2s three ways, in momentum: three nodes, one of them past the fringe. The momentum radial functions of the same three lithium 2s orbitals, weighted by p² as a radial density is, each scaled by its largest magnitude and signed to start negative, against momentum in units of lithium hydride's π/R. Every one has exactly one node — the hydrogenic at 0.624 π/R, the Hartree–Fock at 0.889 and the nodeless Slater function, which has no node in position, at 1.080, just past the fringe.

The node a nodeless orbital has

Lithium hydride's would-be minimum in momentum was traced to the 2s function's node at 0.624 π/R, with a warning that the position belonged to the hydrogenic model and that a nodeless Slater function would have no node at all. Solving the lithium atom properly moves the node to 0.889 π/R; the nodeless function has one too, at 1.080, because a node in momentum is not a node in position but a disagreement between a function's sum and its slope at the nucleus. Lithium hydride's own bond has no minimum with any of the three. What the function decides is whether a minimum can be born at the node at all.

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Where the atoms go

VSEPR as a repulsion minimisation rather than a table, the angles that fall out of it, and the case where five sites are not all alike.

4 sites, minimised. The arrangement of 4 points on a sphere that minimises their mutual repulsion. The angles printed were measured off the result rather than quoted, and the shape was not assumed.

VSEPR, computed

The tetrahedral angle is not 109.5 degrees because a textbook says so. It is arccos(−1/3), and it falls out of minimising the repulsion of four points on a sphere without ever being written down.

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Five sites are not five of a kind. The minimised arrangement of five points, with the two axial sites marked apart from the three equatorial ones. Their neighbour angles differ, so the two kinds of position are genuinely different places — which the shape's name does not convey.

Five sites are not alike

Every other common arrangement has one or two distinct angles. Five has three, because two of its positions are on an axis and three are round an equator — and a molecule built that way does something about it.

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water — C2v. The molecule with the point group found from its coordinates rather than looked up: every candidate operation was applied and kept when it permuted the atoms among themselves.

Why water is bent

The standard answer is lone pair repulsion, it predicts the right direction, and it cannot predict the magnitude. A better rule can, and the heavier hydrides show where both accounts run out.

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Eight points: the cube loses. The cube and the minimised arrangement of eight points on a sphere, with the repulsion energy of each computed. The minimum is a square antiprism — the cube twisted by forty-five degrees on one face — and the margin is about one part in three hundred.

The shapes above six coordination

Eight points on a sphere do not arrange themselves in a cube. They twist one face by forty-five degrees, and above six the arrangements stop being the ones anybody would name and start being the ones a minimisation finds.

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sp3 hybrids. The directions the hybrids point, with the angle between them computed from the coefficients rather than quoted. The set is an orthogonal transformation of the atomic orbitals, so it describes the same space in different coordinates.

Bent's rule, against the substituent series

More electronegative substituents get more p character, so the angle between them shrinks. The rule predicts a trend, the trend is observed, and the quantity it depends on turns out not to be one quantity.

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Bond angle against lone-pair weight, 2 lone and 2 bonding. The bond angle a weighted repulsion minimisation gives for 2 lone pairs and 2 bonding pairs, as the lone-pair weight runs from one to 3.2. The marked molecules are water and hydrogen sulfide, each placed at the weight that reproduces its measured angle.

What a lone pair is worth

A lone pair repels more than a bonding pair, says VSEPR, without saying how much more. Put a number on it and fit that number to water, and the same number is wrong for hydrogen sulfide by a factor of two — which means it was never a property of a lone pair.

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Angles at exponents 1, 2, 3, 6, 12. The distinct angles of the minimised arrangement of 4, 5, 6, 7 points, under a repulsion going as one over r to the power 1, 2, 3, 6, 12. Where the arrangement is the maximally symmetric one the angles do not move at all; where it is not, both the angles and how many of them there are depend on the law assumed.

Which angles are symmetry and which are the model

VSEPR says electron pairs repel and never says by what law. For four, five and six domains it makes no difference whatever — change the exponent by a factor of twelve and not one angle moves. For seven it decides the answer.

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