Concept

Vibrational modes — where it appears

The independent patterns of motion a molecule vibrates in, 3N−6 of them for a non-linear molecule. Each is an eigenvector of a mass-weighted second-derivative matrix, and it is generally not the stretch of any one bond.

Named by 33 essays across 6 fields — each of them below, with the objects they name alongside it.

H₂O: 3 distinct modes. The displacement of every atom in 3 normal modes of H₂O, drawn from the eigenvectors of the mass-weighted Hessian. Under each is the internal coordinate with the largest share of the motion and how large that share is; where no coordinate holds nine tenths, the mode is not a motion of one bond or one angle and is labelled so.

Normal modes are not bond stretches

Water has two stretching frequencies and two O–H bonds, and it is almost irresistible to pair them off. Computed, each mode is exactly half in one bond and half in the other, and neither frequency belongs to a bond at all.

spectra · Normal mode
H₂O and its D isotopologue. Every frequency of H₂O joined to the frequency the same force field gives when every H is replaced by D, with the ratio on each join. The force constants were not refitted and could not be: they do not depend on mass. The product of all the ratios is fixed by the masses and the moments of inertia alone, and is checked against that identity while this figure is drawn.

The isotope shift is arithmetic

Replace hydrogen with deuterium and every frequency drops. The usual rule says by a factor of the square root of two — and of water's three modes, not one of them does that. What is exact is a different identity, and the force constants cancel out of it.

spectra · Normal mode
¹¹BF₃: what each mode is made of. ¹¹BF₃. Each row is one distinct frequency and each column one internal coordinate; the bar is the share of the motion in that coordinate. A mode whose largest share reaches nine tenths is a motion of one bond or one angle and is named for it. 1 of 4 here are.

Group frequencies, and where they stop

A carbonyl band sits near 1,700 wavenumbers in every ketone anybody looks at, and that regularity is real. Computed for a set of small molecules, four of twenty-one distinct frequencies belong to a single internal coordinate — and the four are exactly the coordinates symmetry leaves alone.

spectra · Normal mode
6 molecules, counted. How many vibrations each molecule has, how many symmetry species they fall into, and how many frequencies are infrared active, Raman active, both, or neither. Every column after the first counts frequencies rather than modes, because a degenerate pair is one line in a spectrum. The molecules with a centre of inversion are the ones with nothing in the both column — mutual exclusion as a computed count. Nothing here uses a force constant.

How many frequencies, not how many modes

Benzene has thirty vibrations. It has twenty distinct frequencies, and of those, eleven can be seen — four in the infrared and seven in the Raman, with no band in common. The other nine are invisible to both experiments, exactly.

spectra · Spectrum
Donation strengthens the C–O bond, back-donation weakens it. Two interactions computed as two-level problems: 0.39 of an electron donated out of the ligand's σ orbital, worth 0.06 on the C–O bond order, and 0.5 donated back into π*, worth -0.4. Beside them, six measured stretching frequencies: five isoelectronic species differing only in charge, and free CO.

Back-bonding is two interactions

A carbon monoxide molecule bound to a metal donates from an orbital that is slightly antibonding and accepts into one that is strongly antibonding, so the two halves of the bonding move its stretching frequency in opposite directions. Five isoelectronic complexes differing only in charge settle which wins — and one of them stretches above free CO.

applied · Electron count
Dipole selection rules in Td. For every pair of symmetry species, whether an electric dipole transition between them is allowed and along which polarisation. An entry is allowed exactly when the triple product of representations contains the totally symmetric one.

Selection rules are one theorem

An integral over all space vanishes unless the integrand is totally symmetric. Every selection rule in spectroscopy is that sentence with a different integrand — and the rule of mutual exclusion falls out rather than being remembered.

symmetry · Representation
4 molecules, counted. How many vibrations each molecule has, how many symmetry species they fall into, and how many frequencies are infrared active, Raman active, both, or neither. Every column after the first counts frequencies rather than modes, because a degenerate pair is one line in a spectrum. The molecules with a centre of inversion are the ones with nothing in the both column — mutual exclusion as a computed count. Nothing here uses a force constant.

Two structures, two spectra

A linear XY₂ gives two infrared bands, one Raman band and no band in common. A bent XY₂ gives three of each and three in common. Counting settles the shape, without a force constant, an assignment or a single measured frequency.

spectra · Spectrum
benzene: 30 vibrations. The vibrational representation, obtained by subtracting the translations and rotations from the full set of Cartesian displacements, with the infrared and Raman activity of each species read off the same character table.

What an absence proves

A band that symmetry forbids is not weak. Its intensity is zero, exactly, by a theorem — while a band that is merely too faint to see is absent for reasons no theorem covers. The two look identical in a spectrum and support completely different conclusions.

spectra · Spectrum
cyclobutadiene: what alternation costs and gains. The π energy of cyclobutadiene as its bonds are alternated by β(1 ± δ), the elastic cost of alternating them at a stated stiffness, and the sum. The π curve falls linearly in δ, which is measured here and is the whole difference between a molecule that distorts and one that does not. The stiffness is a stated parameter, so where the minimum falls is not a claim; which power of δ each curve goes as is.

The vibration that lowers the symmetry

A molecule in a degenerate electronic state distorts until the degeneracy is gone. Which distortion it needs is a direct product; whether it wins is a race between a π energy falling linearly and a σ frame resisting quadratically, and both powers are measured here.

beyond · Aromaticity
Every force field the spectrum permits. 5 force fields for H₂O, each one refitted with rr:O:H,H held at the value on the axis, and every one of them reproducing all of the molecule's own frequencies. The heavy line is the error each makes on the isotopologue it was never fitted to. The spectrum cannot choose between these fields; the isotopologue can.

The force field is not in the spectrum

Water has three vibrational frequencies and its force field has four constants, so the spectrum cannot determine the field. A whole family of quite different fields reproduces all three frequencies exactly, and only a second isotopologue can tell them apart.

wrong · Normal mode
carbon dioxide: D∞h worked in D2h. The vibrations of carbon dioxide, computed in D2h because D∞h has infinitely many operations and the reduction formula divides by the order of the group. Each constructed operation is checked against the molecule before use. The count must come out at 3N−5 rather than 3N−6 — 4 for 3 atoms — because rotation about the molecular axis moves no atom and is not a motion of the molecule at all.

An infinite group, worked in a finite one

A linear molecule has infinitely many symmetry operations, and every formula in character theory divides by the number of them. The standard device is to work in a finite subgroup — and it is worth computing what that trade costs rather than putting it in a footnote.

symmetry · Point group
6 fitted force fields. Every valence force field fitted here, ordered by the size of its bond stretching constant, with the stretching frequencies of the molecule beside it. The two orders are not the same, which is the whole of what separates a force constant from a frequency. The last two columns say how many constants were fitted to how many observed frequencies, and a field with as many of the first as the molecule has distinct frequencies fits exactly and reports nothing.

The frequency is not the bond strength

Sulfur dioxide's S–O force constant is larger than water's O–H constant, and its stretching bands sit at a third of the frequency. A vibrational frequency carries a mass as well as a force, and the two cannot be separated by looking at a spectrum.

wrong · Normal mode
Dipole selection rules in Oh. For every pair of symmetry species, whether an electric dipole transition between them is allowed and along which polarisation. An entry is allowed exactly when the triple product of representations contains the totally symmetric one.

Why a d–d band is weak

In a centrosymmetric complex the transition between the two halves of a split d shell is forbidden — exactly, by parity, with no small quantity anywhere. What makes it visible at all is that the molecule is never quite centrosymmetric, and the computation says which vibrations do the work.

spectra · Representation
methane, substituted 5 ways. CH₄, CH₃D, CH₂D₂, CHD₃, CD₄ — the same molecule with the same force constants, differing only in which nuclei are heavy. Every column is a consequence of which of the parent's operations survive the mass pattern: the surviving set is a subgroup, it is named from its own conjugacy classes, and the vibrations are reduced in it. The allowed and computed columns come from group theory and from the mass-weighted Hessian respectively, and they agree in every row.

A spectrum that changes when only a mass does

Methane has four distinct vibrational frequencies and two infrared bands. Replace two of its hydrogens with deuterium and it has nine and eight — with every force constant identical, every nucleus where it was, and the potential energy surface unchanged.

spectra · Spectrum
H₂O: 3 distinct modes. The displacement of every atom in 3 normal modes of H₂O, drawn from the eigenvectors of the mass-weighted Hessian. Under each is the internal coordinate with the largest share of the motion and how large that share is; where no coordinate holds nine tenths, the mode is not a motion of one bond or one angle and is labelled so.

The six motions that are not modes

Three N minus six is quoted in every textbook and the six are almost never computed. Diagonalising a mass-weighted Hessian gives six eigenvalues at arithmetic noise, and projecting their vectors onto the three translations and three rotations written down from the geometry alone accounts for every one of them.

spectra · Normal mode
Mutual exclusion across every group here. The 20 groups with tables here, each with its highest rotation order, whether it has a centre of inversion, which of its representations carry a coordinate, which carry a product of coordinates, and whether any carries both. Every group with a centre excludes, which is a theorem. 1 group without a centre excludes as well — D5h — so the rule does not run backwards, and the counterexample needs a fivefold axis.

Mutual exclusion does not prove a centre

A centrosymmetric molecule shows no band in both its infrared and its Raman spectrum. The rule is a theorem and its converse is read off as though it were part of it — but ferrocene in the gas phase has no centre of inversion and no coincidence either, and the reason is that a fivefold axis separates the coordinates from their products where a threefold or fourfold axis cannot.

spectra · Spectrum
The dipole moment, and how many bands there are. For each of five molecules: the dipole moment of the point-charge model, the number of modes whose dipole derivative does not vanish, and the largest derivative. The molecules with no dipole at all have the most active bands, which is the whole of the argument.

A dipole is not what an infrared spectrum sees

Carbon dioxide has no dipole moment at all and three of its four modes are infrared active. Methane has none and six of nine; boron trifluoride none and five of six. Water, which has the largest dipole of the five, has three modes and three bands — and its dipole predicted neither number.

shape · Dipole
boron trifluoride at 1454 cm⁻¹, shared out four ways. One mode of boron trifluoride, with each internal coordinate's share of it computed by four conventions. Each convention is a bar in every group; the groups are the coordinates. A number quoted for this band without saying which bar it is has not said much.

How much of a band is a bond stretch

Boron trifluoride's 1454 cm⁻¹ band is 36.7 per cent B–F stretch, or 49.9, or 97.9, depending on which of four standard ways of sharing a mode out among internal coordinates is used. All four are defensible, all four sum to one, and the spread between them is sixty-one percentage points on one band of one molecule.

spectra · Normal mode
The total energy against the distortion, at several gaps. The elastic cost plus the second-order lowering, for five gaps between the ground state and the excited state it mixes with. The critical gap is 1.00: above it the symmetric structure is the minimum, below it the minimum has moved off zero, and nothing about the molecule is degenerate in either case.

A distortion needs two states

A degenerate electronic state cannot survive — that is the Jahn–Teller theorem, and it can be computed. A closed shell can fail to survive too, and the condition is a number: the symmetric structure holds only while the nearest excited state of the right symmetry lies above 2λ²/k, and one of ten symmetry species in an octahedron is the right one.

applied · Peierls distortion
Three bands of one spectrum, and the bond length behind each. Nitrogen's three photoelectron bands, drawn as the vibrational intensity distributions computed from the measured bond lengths and vibrational constants of the three states of the ion. Each band's lines add to one. The middle band is spread over five lines because the electron removed came out of a strongly bonding orbital and the bond lengthened by 77.22 thousandths of an ångström; the outer two keep 92 and 88 per cent of their strength in a single line.

The width of a band is a bond length

Nitrogen's three photoelectron bands are one sharp line, a progression of five, and a line with a shoulder. Computed from the measured bond lengths of the three states of the ion, the intensities come out at 0.917, 0.263 and 0.880 in the first line of each — because removing a weakly bonding electron lengthens the bond by 18.7 thousandths of an ångström, a strongly bonding one by 77.2, and an antibonding one shortens it by 23.7.

spectra · Photoelectron
What boron trifluoride's bands are strong in, and what they move. Every infrared-active mode of boron trifluoride, with its band strength and the root-mean-square displacement of its atoms in the zero point, each scaled to its own largest. The two do not order the modes the same way — the rank correlation between them is 0.2 — and the strongest band belongs to the mode at 719 cm⁻¹, in which 89.93 per cent of the motion is the lightest atom's. Every mode moves the same weighted amount of mass, exactly, so that is not what separates them either.

The mode that moves least radiates most

Boron trifluoride's strongest infrared band is the one in which the fluorines barely move: ninety per cent of the motion belongs to the boron, which is a fifth of the molecule's mass. The mode that moves the most mass is nine and a half times weaker. Across five molecules the rank correlation between band strength and how far the atoms actually go runs from +1 to −0.66, and every normal mode carries exactly the same weighted motion by construction.

shape · Dipole
A photoelectron band is a filter, and the group chooses the filter. The Huang–Rhys factor of every vibration of five molecules under a change of geometry that lengthens every bond alike — which is what removing an electron from a non-degenerate orbital does. On a logarithmic scale spanning sixteen decades, eight modes carry the whole of it and the rest sit on the floor at arithmetic noise. Which ones is decided by the point group: only a totally symmetric vibration can appear, whatever the size of the change.

A band is a filter on the modes

A photoelectron band's vibrational structure reports the frequencies of a few of the ion's vibrations and is silent about the rest, and which few is decided by the point group before any geometry is known. Under a change of shape that lengthens every bond alike, methane's totally symmetric stretch gets a Huang–Rhys factor of 0.905 and its other eight modes get between 10⁻²⁸ and 10⁻³⁵.

spectra · Photoelectron
How many coordinates, and how many motions. For each of six molecules, one square per internal coordinate the valence set carries — bond stretches, angle bends and an out-of-plane wag where there is one — with a rule drawn at the number of vibrational degrees of freedom. three of them have more coordinates than motions, and which ones is decided by shape rather than by size: ammonia's three angles are independent and boron trifluoride's are not, and the only difference is that one is flat.

More coordinates than motions

Methane has ten internal coordinates and nine ways to vibrate, boron trifluoride seven and six, formaldehyde seven and six. The excess is not bookkeeping: it is a combination of coordinates that describes no displacement of any atom, and adding twenty-five units of force constant along it moves every frequency by five parts in a hundred million.

symmetry · Normal mode
The shallowest slope, and the steepest. For three molecules, the softest and stiffest vibrations, the species each belongs to, and what a unit distortion along each costs. The cost is not taken from the frequency: it is computed by resolving the distortion onto the normal coordinates in the mass-weighted metric and adding up ω²q². That it comes back as the frequency is the identity the whole comparison rests on — the species decomposition uses only the coordinates and the group, and the cost uses only the masses and the force constants, and the two have to agree on this case before they can be asked to disagree on any other.

The coordinate it was already soft along

A distorted structure can be resolved into the symmetry species of its ideal group, and that resolution cannot say which coordinate a molecule fell down by itself and which one something outside pushed it along. The force field answers that, and the two halves agree on the case where they must — a unit distortion along a normal mode costs exactly that mode's frequency, to a part in a million, computed from masses and force constants by one side and from coordinates and characters by the other.

symmetry · Point group
10 of 55 force constants that no spectrum can see. The map from methane's 55 independent force constants to its Cartesian Hessian, as a spectrum: 45 directions the frequencies respond to and 10 they do not, out of 55. The null block is exactly the size the redundancy count predicts — 10 for 1 redundancy on 10 coordinates — and the two are computed by different routes, one a rank and one a closed form. A force field quoted to four figures is quoted along 45 directions that were measured and 10 that were chosen.

Ten directions no frequency can see

A redundant force field has one obvious flat direction. There are ten: methane has fifty-five independent force constants and a ten-dimensional subspace of them that no spectrum can touch. The literature's repair is to project — and the metric a vibrational analysis is naturally written in cannot define the projection at all, because a redundancy is a null vector of it.

symmetry · Normal mode
The factor of thirteen was generous. An invented error model against the one computed from a force field. Its invented mismatch of five per cent made the correlation between the parent and the substituted species worth a factor of 12; the computed mismatch of 35 per cent makes it worth 2.5. The substitution structure went from being 2.5 times worse than a direct fit to 26, and at the computed size of the correction its worst coordinate is out by 10.7 per cent.

The correction that was invented

A standard error model puts the zero-point error in a rotational constant at a few tenths of a per cent, shared between the three moments by invented weights, with the parent and its deuterated form differing by five. Computed from a force field it is 1.88 per cent, one of the three shares is negative, and the mismatch is 35 — so the cancellation the substitution method rests on is worth a factor of 2.5 and not thirteen.

spectra · Rotation
A species label is ambiguous for every one of 17. For each molecule, the share of its vibrations belonging to a symmetry species that appears more than once — the distortions a species label cannot price, because the label picks a space rather than a mode. Every molecule in the census has at least one such species, the share averages 71.4 per cent, and for 9 of 17 the repetition is not forced by the group's capacity — those molecules have fewer vibrations than their group could hold without repeating, and repeat anyway.

A label that prices nothing

Pricing a distortion by its symmetry species works when the species appears once. It appears more than once for every one of seventeen molecules — 71.4 per cent of their vibrations on average belong to a species that is not unique — and for nine of the seventeen nothing forces it: their groups have room to spare and they repeat anyway.

symmetry · Point group
How much of each of methane's force constants the spectrum fixes. Each of methane's 55 force constants, grouped by kind, with the squared length of its projection onto the determined subspace. One means the constant is fixed on its own. All 4 stretching constants are; not one bending constant is, at 0.5357 each. The fractions sum to 45, which is the rank of the map from constants to the Hessian, and that sum is an arithmetic check rather than a result.

The forty-five that are fixed

Methane's fifty-five-dimensional space of force constants has ten directions no frequency can see, and the useful thing to report is the forty-five that are fixed. It is a table: every stretching constant is fixed on its own, no bending constant is, and projecting a fitted field onto the determined subspace takes four fits that span 0.88 mdyn per ångström down to four that span 0.0027.

spectra · Normal mode
One expression, four molecules, a factor of eleven. The computed zero-point correction to each molecule's moment of inertia against the expression A²·Σ(1/ν)/I, which has no fitted quantity in it. The dashed line is the mean dimensionless coefficient, 0.6343; the four points lie within 18 per cent of it, on corrections that span a factor of 11.4. The expression is evaluated from a moment of inertia and a list of wavenumbers, which is what a spectroscopist has before doing anything.

An expression for what was a warning

The zero-point correction to a moment of inertia comes out at 1.88 per cent where a few tenths had been assumed, and heavy molecules are safer. Written out, the correction is a mean curvature times the sum of reciprocal wavenumbers over the moment — one line, evaluated from things a spectroscopist has before starting. One coefficient serves four molecules whose corrections span a factor of eleven.

spectra · Rotation
Where the explanation gives a negative number of vibrations. The usual formula against the answer, for the 15 molecules with internal coordinates here. It is right for 7 of them and wrong for 8, and for sulfur hexafluoride, benzene and both ferrocenes it predicts a negative number of totally symmetric vibrations — which is the clearest possible sign that the quantity being subtracted is not the one that should be.

A formula that predicts minus eleven vibrations

A molecule's count of totally symmetric vibrations is often explained as one per orbit of internal coordinates, less one per redundancy, with methane as the worked example. Computed for fifteen molecules it is right for seven and wrong for eight — and for sulfur hexafluoride, benzene and both ferrocenes it returns a negative number. Two independent corrections turn it into an identity.

symmetry · Point group
How fast the three quarters goes, along each coordinate. The coefficient of the square, for every non-symmetric mode of three molecules, against the mode's own frequency. A single measurement takes one of these — along a bond stretch — and reports the exponent rather than the size. The sizes span a factor of thirty within methane alone, and the coordinates a molecule is softest along are not systematically the most sensitive: ammonia's stiff pair is five times more sensitive than its soft one.

One number was one direction

The departure of a depolarisation ratio from three quarters goes as the square of a distortion, and the exponent was first measured along one bond stretch. Computed along every non-symmetric coordinate the exponent is always two and the coefficient is not: it spans a factor of thirty inside methane. And the ratio is not preferentially sensitive to the coordinates a molecule is soft along — in two molecules of three the stiffest coordinate is the most sensitive.

spectra · Spectrum
The coefficient each principal axis needs. The dimensionless coefficient the molecule-averaged expression requires, evaluated on each principal axis separately rather than on the mean of the three. Across the twelve axes the positive ones span a factor of 2.33, against the 1.36 the molecule-averaged version spans — and one of them is negative, which no positive constant can be.

The axis that goes the other way

One dimensionless coefficient turned a zero-point correction into an expression a spectroscopist could evaluate, and the three principal axes were averaged over to get it. Split by axis it gets worse, not better — the coefficients span 2.3 where the molecule-averaged ones span 1.36 — and water's smallest moment does not grow at all. It shrinks.

spectra · Rotation
Which torsions a molecule's own operations turn backwards. Every torsion orbit of the molecules here that have torsions: how many operations carry the torsion onto itself, how many of those are proper, and which operations reverse it. 7 of 9 orbits are reversed, and in every one the operation doing it is improper — the plane of a planar molecule, a mirror bisecting the torsion's bond, or a centre of inversion at that bond. Proper operations fix torsions too, benzene's twofold axes and hydrogen peroxide's among them, and never reverse one. Staggered ferrocene gives the same rows as eclipsed.

Five coordinates for six vibrations

A torsion is reversed by every improper operation that carries it onto itself and by no proper one, so adding torsions tests the orbit rule on a second kind of signed coordinate — and the rule holds on every molecule. It also moves hydrogen peroxide's count of totally symmetric vibrations from three to four, which a property of a molecule cannot do. Its five coordinates never spanned its six vibrations, and three of fifteen coordinate sets had been counting vibrations they did not describe.

symmetry · Point group

Named alongside it

The objects these essays reach for when they reach for this one.

Normal modeDegeneracyModel limitForce constantIrreducible representationsHarmonic approximationSelection rulesCharacter tablePoint groupValence force fieldConventionInfrared activity

All concepts