Molecular Geometry & Bonding
what the shape decides
Concept

Error propagation — where it appears

Carrying the uncertainty of measured inputs through to a computed result. A difference of two quantities each uncertain by σ is uncertain by σ√2, which is why a small difference between two well-measured numbers can be worth much less than either.

Named by 8 essays across 2 fields — each of them below, with the objects they name alongside it.

What it would cost to destroy each refutation. For every discordant pair in the collection, the measurement error that would be needed to reverse it, as a fraction of that predictor's own spread of measurements. Nothing is quoted: the question is not what the uncertainties are but how large they would have to be. The cheapest to destroy needs 3.4 per cent of the range and the dearest needs 51.6.

The error bar that would be needed

Two things a pair of measurements can say without any model both treat their numbers as exact. The quoted measurements carry no uncertainties, and inventing some would be worse than having none — so the question is asked the other way round. Not what the errors are, but how large they would have to be. The three refutations that seemed most worrying turn out to be the sturdiest of the lot.

bonding · Models The bracket has no upper end. Every price is multiplied by √2 over √(1 + r² − 2ρr), where ρ is the correlation between the two measurements' errors and r is the ratio of their sizes. For equal precision the factor is 1/√(1 − ρ), which is one at independence and unbounded at perfect correlation. The other extreme the question asked for is not a number.

The other end of the bracket is not a number

Every claim can be priced by the measurement error it would take to overturn it, assuming the two errors independent, and the correlated extreme ought to turn each price into a bracket. At perfect correlation between equally precise measurements the difference is exact and the price is infinite — and every price is multiplied by the same factor, so the ordering of prices cannot change.

bonding · Models One per cent on the barrier is 3.6 per cent on the splitting. The ground inversion splitting of NH₃'s quartic well against the barrier height, both logarithmic, with the geometry and the reduced mass held at their measured values. The curve is visibly bent: its local slope is -3.56 at the published barrier and steepens either side, so a power law is a tangent to it rather than a description of it. The measured 0.7935 wavenumbers is reached at 2330, which is 15.3 per cent above the quoted 2020 — so a splitting wrong by a factor of 1.70 is a barrier wrong by a sixth. The same derivative read the other way is what makes a barrier quoted to ten per cent useless for predicting a splitting.

The exponent that runs both ways

How hard does a splitting depend on a barrier? Locally, as the power −3.5628 — and the local slope runs from −2.53 to −6.15 across the same sweep, so there is no power law. What is exact is stranger: rescaling the equation forces the mass exponent to be one below the barrier's and the geometry exponent to be twice the mass's, so the model's three sensitivities are one number and the arithmetic reproduces both identities to six decimals.

shape · Inversion The ranking is fragile and the headline is not. The correlation required to disturb two different things. Reordering the easiest neighbouring pair needs ρ = 0.154, which is weak enough to expect. Displacing the collection's most fragile claim outright needs ρ = 0.954, which is near-perfect correlation. So a per-predictor structure scrambles the middle of the ordering and leaves the top of it alone.

The ranking moved and the headline did not

One correlation applied across a collection multiplies every price by the same number, so it slides the fragility ordering rigidly and cannot scramble it. Give each predictor its own correlation and the ordering does move — but not at the top. The two most fragile claims come from the same predictor, share a factor, and are locked in order at every correlation whatever; the easiest swap anywhere below them needs only ρ = 0.15.

bonding · Models The ceiling moves by 8.7-fold across the gauche energy's own reported range. The rotamer ceiling against butane's gauche energy, for the rotor counts each convention assigns to a five-membered and a six-membered closure, with the three measured accelerations drawn as horizontal lines. Across the reported range the ceiling moves by up to 8.70-fold, and two of the nine verdicts cross a measurement during the sweep. The natural prediction is that this input would be the smaller lever of the two; it is the larger.

The lever that was supposed to be smaller

Sweeping the rotor conventions leaves every verdict unmoved, and suggests that the other quoted input will be a smaller lever. It is a larger one. Sweeping butane's gauche energy over its reported range moves the ceiling by 8.7-fold, flips the six-membered verdict at 3.630 kilojoules a mole — inside the quoted error bar — and takes the five-membered refutation with it at 4.422.

shape · Strain Two sweeps, and one of them covers 28 per cent less ground than the other. What each of the two sweeps reaches, measured in the one variable the rotamer ceiling has: g/RT. The temperature sweep lies entirely inside the gauche sweep, so it explored no arrangement the other does not. Their widths are 0.581 and 0.807, their union is 0.807, and treating them as independent would have credited them with 1.387.

Two sweeps and one lever

The rotamer ceiling depends on the gauche energy and on the temperature only through their ratio, so a sweep of either traces the same curve. Measured in that one variable, the temperature sweep lies entirely inside the gauche sweep — it covered no ground the other does not, and the whole reported spread in one energy is worth a temperature swing from 196 to 353 kelvin.

shape · Strain One ranking, three chains. The collection's priced claims in order of fragility, with each claim placed in its own predictor's column. Two claims sharing a predictor share its error correlation, so their prices carry the same factor and their relative order cannot be changed by any correlation structure whatever — a column is rigid. Claims in different columns can be reordered at a price. So the ranking is not one ordering but three chains interleaved, and only the within-column statements need no assumption about anybody's errors.

Three chains and ninety orderings ruled out

Two claims priced against the same predictor share its error correlation, so no correlation structure can reorder them. That makes the collection's fragility ranking three chains rather than one list — and thirty of the hundred and twenty orderings of five claims are reachable, with the other ninety forbidden before a single measured difference is looked at.

bonding · Models Two prices, and which is cheaper is a property of the claim. For each slope floor, what it costs to halve it two ways. The measurement price is a standard error on the measured rise, as a fraction of the measured range — the currency every price in this argument has been quoted in. The model price is the change in the computed run, as a fraction of the predictor's own range. They are different currencies and their ordering differs between claims: the angle strain's floor is three times cheaper to move through its model, and the spin-only moment's cannot be moved through its model at any price at all.

A denominator needs three currencies

Every price in this argument has been a price on a measured rise. A slope floor is a rise over a run, the run is computed rather than measured, and pricing it turns out to need three currencies rather than one — because one predictor's run is a graph eigenvalue, one is a convention, and one is a difference of square roots of integers that nothing defensible moves.

bonding · Models

Named alongside it

The objects these essays reach for when they reach for this one.

Measurement uncertaintyModel limitPredictorRing strainUnderdeterminationClosed formConventionModel selectionMonotonicityApproximationConformerCorrelation

All concepts